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Molecular Evolution
Workshop on Molecular Evolution

Director: Michael Cummings, University of Maryland


Course Date: July 27 - August 8, 2008
Extended Topics Date:  August 9 - 15, 2008
Online Application Form, (PDF) Deadline: March 3, 2008
Course Website

The Workshop on Molecular Evolution has been the finest course of its type in the world since it was started in 1988. The workshop consists of a series of lectures, demonstrations, and computer laboratories that cover various aspects of molecular evolution. A distinguishing feature of the workshop is a well-equipped computer laboratory with Linux workstations and servers for comparative analysis of molecular data. Authors and experts in the use of computer programs and packages such as Clustal W and Clustal X, FASTA, GCG, LAMARC, MrBayes, PAML, PAUP*, and PHYLIP provide demonstrations and consultations. This two-week program is designed for established investigators, postdoctoral fellows, and advanced graduate students with prior experience in molecular evolution and comparative genomics. Scientists with a strong interest in molecular evolution, systematics, and population genetics are encouraged to apply. Enrollment is limited to 60 students, and 20 students will be admitted to an extended topics session for the purpose of analyzing their research data sets. Many participants find the extended topics session to be especially useful.

Topics to be covered include:

  • Databases and sequence matching: database searching: protein sequence versus protein structure; homology; mathematical, statistical, and theoretical aspects of sequence database searches

  • Phylogenetic analysis: theoretical, mathematical and statistical bases; sampling properties of sequence data; Bayesian analysis; hypothesis testing

  • Maximum likelihood theory and practice in phylogenetics and population genetics: coalescent theory; maximum likelihood estimation of population genetic parameters

  • Molecular evolution integrated at organism and higher levels: population biology; biogeography; ecology; systematics and conservation

  • Molecular evolution and development: gene duplication and divergence; gene family organization; coordinated expression in evolution

  • Applied molecular evolution: molecular evolution in bioinformatics; evolution of large multigene families

  • Comparative genomics: genome content; genome structure; genome evolution
  • Transposable elements: types; history; evolutionary dynamics; as a major component of genomes

  • Molecular evolution integrated at lower levels: biochemistry; cell biology; physiology; relationship of genotype to phenotype


Partial funding support for the Workshop comes from the National Aeronautics and Space Administration (NASA). Computer equipment is generously provided by Apple Computer and the University of Maryland Institute for Advanced Computer Studies, and some software is generously provided by Accelrys.

2007 Course Faculty & Lecturers:
Peter Beerli, Florida State Unviersity
Joseph Bielawski, Dalhousie University
Alexei Drummond, University of Auckland
Scott Edwards, Harvard University
Joseph Felsenstein, University of Washington
Mary Kuhner, University of Washington
Paul Lewis, University of Connecticut
Axel Meyer, University of Konstanz, Germany
Michael Miyamoto, University of Florida
William Pearson, University of Virginia
David Rand, Brown University
Fredrik Ronquist, Florida State University
David Sinclair, Harvard Medical School
David Swofford, Florida State University
Steven Thompson, Florida State University
Paul Turner, Yale University
Daniel Voytas, Iowa State University
Anne Yoder, Duke University
Shozo Yokoyama, Emory University
Derrick Zwickl, NESCent

 
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